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Keyword Connections - dna methylation Keywords

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Bibliographies	[1] Inflammatory colonic carcinogenesis: a review on pathogenesis and immunosurveillance mechanisms in ulcerative colitis [2] A Pan-Cancer Analysis Reveals High-Frequency Genetic Alterations in Mediators of Signaling by the TGF-β Superfamily [3] Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas [4] Performance of a DNA methylation marker panel using liquid-based cervical scrapes to detect cervical cancer and its precancerous stages. [5] Evaluating DNA methylation age on the Illumina MethylationEPIC Bead Chip. [6] Epigenome-wide DNA methylation in placentas from preterm infants: association with maternal socioeconomic status [7] Combined SOM-portrayal of gene expression and DNA methylation landscapes disentangles modes of epigenetic regulation in glioblastoma [8] Cannabis use is associated with potentially heritable widespread changes in autism candidate gene DNA methylation in sperm. [9] Genome-wide reinforcement of DNA methylation occurs during somatic embryogenesis in soybean. [10] An integrative cross-omics analysis of DNA methylation sites of glucose and insulin homeostasis. [11] Duration of breastfeeding is associated with leptin (LEP) DNA methylation profiles and BMI in 10-year-old children. [12] Meso-tetra(4-carboxyphenyl)porphine-Enhanced DNA Methylation Sensing Interface on a Light-Addressable Potentiometric Sensor. [13] Prediction of Alzheimer's disease based on deep neural network by integrating gene expression and DNA methylation dataset [14] Whole-genome DNA methylation patterns and complex associations with gene expression associated with anthocyanin biosynthesis in apple fruit skin. [15] Discovery of potential DNA methylation markers for forensic tissue identification using bisulphite pyrosequencing [16] Exposure to NO, CO, and PM is linked to regional DNA methylation differences in asthma. [17] The Pancancer DNA Methylation Trackhub: A Window to The Cancer Genome Atlas Epigenomics Data. [18] Electrochemical and Optical Biosensing Strategies for DNA Methylation Analysis. [19] Quantification of gene-specific DNA methylation in oesophageal cancer via electrochemistry [20] Novel Approaches in DNA Methylation Studies - MS-HRM Analysis and Electrochemistry [21] Novel approaches in DNA methylation studies - MS-HRM analysis and electrochemistry [22] County poverty levels influence genome-wide DNA methylation profiles in African American and European American women [23] Exogenous Promoter Triggers APETALA3 Silencing through RNA-Directed DNA Methylation Pathway in . [24] Study of porphyrin-modified liquid exfoliated graphene field-effect transistors for evaluating DNA methylation degree. [25] Systematic evaluation and validation of reference and library selection methods for deconvolution of cord blood DNA methylation data. [26] Identification of key DNA methylation-driven genes in prostate adenocarcinoma: an integrative analysis of TCGA methylation data. [27] First evidence of association between past environmental exposure to dioxin and DNA methylation of CYP1A1 and IGF2 genes in present day Vietnamese population. [28] Erratum: Reading between the Lines: "ADD"-ing Histone and DNA Methylation Marks toward a New Epigenetic "Sum" (ACS Chemical Biology (2016) 11:3 (554-563) DOI: 10.1021/acschembio.5b00830) [29] Identifying blood-specific age-related DNA methylation markers on the Illumina MethylationEPIC® BeadChip. [30] Placental NEGR1 DNA methylation is associated with BMI and neurodevelopment in preschool-age children. [31] Transcriptional alterations in glioma result primarily from DNA methylation-independent mechanisms. [32] Detailed insight into the dynamics of the initial phases of de novo RNA-directed DNA methylation in plant cells. [33] Global DNA methylation of ischemic stroke subtypes. [34] Altered amygdala DNA methylation mechanisms after adolescent alcohol exposure contribute to adult anxiety and alcohol drinking [35] Gene expression and cytosine DNA methylation alterations in induced pluripotent stem-cell-derived human hepatocytes treated with low doses of chemical carcinogens. [36] Dysregulation of DNA methylation patterns may identify patients with breast cancer resistant to endocrine therapy: A predictive classifier based on differentially methylated regions. [37] Predicting gene expression using DNA methylation in three human populations. [38] Mismatched Prenatal and Postnatal Maternal Depressive Symptoms and Child Behaviours: A Sex-Dependent Role for DNA Methylation in the Wirral Child Health and Development Study. [39] Effect of chelating and antioxidant agents on morphology and DNA Methylation in Freeze-drying rabbit (Oryctolagus cuniculus) spermatozoa. [40] Investigating the impact of cigarette smoking behaviours on DNA methylation patterns in adolescence [41] Epigenetic modulation of glycoprotein VI gene expression by DNA methylation. [42] CpGtools: A Python Package for DNA Methylation Analysis. [43] Aberrant DNA Methylation Pattern may Enhance Susceptibility to Migraine: A Novel Perspective. [44] Genome-wide DNA methylation and transcriptome and proteome changes in Mycobacterium tuberculosis with para-aminosalicylic acid resistance [45] Maternal fatty acid concentrations and newborn DNA methylation. [46] Population DNA methylation studies in the Developmental Origins of Health and Disease (DOHaD) framework. [47] Associations between metal exposure and global DNA methylation in potentially affected people in E-Waste recycling sites in Taizhou City, China [48] Distinct epigenetic features of tumor-reactive CD8+ T cells in colorectal cancer patients revealed by genome-wide DNA methylation analysis. [49] Exposure to persistent organic pollutants and sperm DNA methylation changes in Arctic and European populations. [50] Quantum scale organic semiconductors for SERS detection of DNA methylation and gene expression [51] A Genome-Wide Integrative Association Study of DNA Methylation and Gene Expression Data and Later Life Cognitive Functioning in Monozygotic Twins. [52] Epigenome wide comparison of DNA methylation profile between paired umbilical cord blood and neonatal blood on Guthrie cards. [53] Targeting DNA methylation depletes uterine leiomyoma stem-cell enriched population by stimulating their differentiation [54] Development of DNA methylation markers for sperm, saliva and blood identification using pyrosequencing and qPCR/HRM [55] Sperm DNA methylation altered by THC and nicotine: Vulnerability of neurodevelopmental genes with bivalent chromatin [56] The combined effect of obesity and aging on human sperm DNA methylation signatures: inclusion of BMI in the paternal germ line age prediction model [57] role of genetic and environmental factors in dna methylation of lipid metabolism [58] regulation of the dna methylation landscape in human somatic cell reprogramming by the mir-29 family [59] meristem micropropagation of cassava (manihot esculenta) evokes genome-wide changes in dna methylation [60] hoxa9 and sox1 - a promising dna methylation based diagnostic biomarker for epithelial ovarian cancer [61] endothelial heterogeneity in the umbilico-placental unit: dna methylation as an innuendo of epigenetic diversity [62] a tdg/cbp/rarα ternary complex mediates the retinoic acid-dependent expression of dna methylation-sensitive genes [63] prenatal alcohol exposure is associated with adverse cognitive effects and distinct whole-genome dna methylation patterns in primary school children [64] genome-wide profiling of dna methylation and gene expression in crassostrea gigas male gametes [65] exploring the link between nucleosome occupancy and dna methylation [66] age-associated decrease in global dna methylation in patients with major depression [67] genome-wide analysis of dna methylation, copy number variation, and gene expression in monozygotic twins discordant for primary biliary cirrhosis [68] the role of dna methylation in xylogenesis in different tissues of poplar [69] Machine learning analysis of DNA methylation in a hypoxia-immune model of oral squamous cell carcinoma. [70] genome-wide characterization of dna methylation in an invasive lepidopteran pest, the cotton bollworm helicoverpa armigera [71] epigenome-wide dna methylation profiling identifies differential methylation biomarkers in high-grade bladder cancer [72] maternal obesity alters fatty acid oxidation, ampk activity, and associated dna methylation in mesenchymal stem cells from human infants [73] does dna methylation facilitate phenotypic plasticity in invertebrates? [74] the effect of the ovarian varicose vein on the dna methylation in the rat’s oocyte [75] using a medium-throughput comet assay to evaluate the global dna methylation status of single cells [76] 5-lipoxygenase dna methylation and mrna content in the brain and heart of young and old mice [77] genome-wide estimates of mutation rates and spectrum in schizosaccharomyces pombe indicate cpg sites are highly mutagenic despite the absence of dna methylation [78] analysis of dna methylation and hydroxymethylation in the genome of crustacean daphnia pulex [79] egcg prevents high fat diet-induced changes in gut microbiota, decreases of dna strand breaks, and changes in expression and dna methylation of dnmt1 and mlh1 in c57bl/6j male mice [80] genome-wide dna methylation profiling of cell-free serum dna in esophageal adenocarcinoma and barrett esophagus [81] dna tumor virus regulation of host dna methylation and its implications for immune evasion and oncogenesis [82] Identification of genes required for de novo DNA methylation in Arabidopsis [83] Adult Glucocorticoid Exposure Leads to Transcriptional and DNA Methylation Changes in Nuclear Steroid Receptors in the Hippocampus and Kidney of Mouse Male Offspring [84] Salivary DNA Methylation as an Epigenetic Biomarker for Head and Neck Cancer. Part II: A Cancer Risk Meta-Analysis [85] The effect of season of birth on brain epigenome-wide DNA methylation of older adults. [86] Spatial progression and molecular heterogeneity of IDH-mutant glioblastoma determined by DNA methylation-based mapping [87] De novo DNA methylation by Dnmt3a and Dnmt3b is dispensable for nuclear reprogramming of somatic cells to a pluripotent state [88] Cell-type-specific DNA methylation analysis of the frontal cortices of mutant Polg1 transgenic mice with neuronal accumulation of deleted mitochondrial DNA.