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Keyword Connections - whole genome sequencing Keywords

Connection Type	Connection
Journals	Nature communications fungal genetics and biology : fg & b eLife Medicine Frontiers in microbiology zhonghua fu chan ke za zhi Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases the international journal of tuberculosis and lung disease : the official journal of the international union against tuberculosis and lung disease Veterinary microbiology euro surveillance : bulletin europeen sur les maladies transmissibles = european communicable disease bulletin Pathogens (Basel, Switzerland) neuroreport tuberculosis (edinburgh, scotland) genomics & informatics
Research Groups	No Research Group Connected
Bibliographies	[1] Resolving a clinical tuberculosis outbreak using palaeogenomic genome reconstruction methodologies. [2] Towards standardisation: comparison of five whole genome sequencing (WGS) analysis pipelines for detection of epidemiologically linked tuberculosis cases. [3] Combining genomics and epidemiology to analyse bi-directional transmission of in a multi-host system. [4] Genotyping of Mycobacterium tuberculosis spreading in Hanoi, Vietnam using conventional and whole genome sequencing methods. [5] Functional annotation of de novo variants from healthy individuals. [6] Effective/cost effective interventions of child mental health problems in low- and middle-income countries (LAMIC): Systematic review. [7] Neuronal fibroblast growth factor 22 signaling during development, but not in adults, is involved in anhedonia. [8] IS-Mediated Transfer of as the Main Route of Resistance Transmission During a Polyclonal, Multispecies Outbreak in a German Hospital. [9] Genomic Insights Into the Complex: An Update. [10] Plasma pharmacokinetics of bedaquiline administered by nasogastric tube in an intensive care unit. [11] A systematic review and meta-analysis of first-line tuberculosis drug concentrations and treatment outcomes. [12] [Chromosomal abnormalities in spontaneous miscarriage specimens detected by combinatorial probe anchor synthesis-based high-throughput low coverage whole genome sequencing]. [13] molecular characterisation of salmonella serovars anatum and ealing associated with two historical outbreaks, linked to contaminated powdered infant formula [14] livestock-associated methicillin resistant staphylococcus aureus (la-mrsa) clonal complex (cc) 398 isolated from uk animals belongs to european lineages. [15] naturally occurring diversity helps to reveal genes of adaptive importance in legumes. [16] response: commentary: probing genomic aspects of the multi-host pathogen clostridium perfringens reveals significant pangenome diversity, and a diverse array of virulence factors [17] editorial: game changer - next generation sequencing and its impact on food microbiology [18] emergence of vibrio cholerae o1 sequence type 75 in taiwan [19] next generation sequencing methods for diagnosis of epilepsy syndromes [20] characterization of the growth of chlamydia trachomatis in in vitro-generated stratified epithelium [21] analysis of dna methylation and hydroxymethylation in the genome of crustacean daphnia pulex [22] Genome Sequencing of Provides Insights into Its Phylogenetic Placement and Mycoparasitism Mechanisms on Morel Mushrooms. [23] Drug-resistance profiling and transmission dynamics of multidrug-resistant Mycobacterium tuberculosis in Saudi Arabia revealed by whole genome sequencing [24] Enriched whole genome sequencing identified compensatory mutations in the RNA polymerase gene of rifampicin-resistant Mycobacterium leprae strains [25] Drug-resistance profiling and transmission dynamics of multidrug-resistant Mycobacterium tuberculosis in Saudi Arabia revealed by whole genome sequencing [26] Enriched whole genome sequencing identified compensatory mutations in the RNA polymerase gene of rifampicin-resistant Mycobacterium leprae strains [27] Whole genome sequencing of multidrug-resistant Salmonella enterica serovar Typhimurium isolated from humans and poultry in Burkina Faso [28] Whole Genome Sequencing of Single Circulating Tumor Cells Isolated by Applying a Pulsed Laser to Cell-Capturing Microstructures. [29] Mycobacterium tuberculosis whole genome sequencing provides insights into the Manila strain and drug-resistance mutations in the Philippines. [30] Evaluating the use of whole genome sequencing for the investigation of a large mumps outbreak in Ontario, Canada. [31] Evaluation of parameters affecting performance and reliability of machine learning-based antibiotic susceptibility testing from whole genome sequencing data. [32] Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study. [33] Characterization and whole genome sequencing of closely related multidrug-resistant Salmonella enterica serovar Heidelberg isolates from imported poultry meat in the Netherlands. [34] Characterization and whole genome sequencing of closely related multidrug-resistant Salmonella enterica serovar Heidelberg isolates from imported poultry meat in the Netherlands [35] Identification of targetable BRAF ΔN486_P490 variant by whole genome sequencing leading to dabrafenib-induced remission of a BRAF-mutant pancreatic adenocarcinoma. [36] Genotyping of Mycobacterium tuberculosis spreading in Hanoi, Vietnam using conventional and whole genome sequencing methods [37] Towards standardisation: comparison of five whole genome sequencing (WGS) analysis pipelines for detection of epidemiologically linked tuberculosis cases. [38] The Future of TB Resistance Diagnosis: The Essentials on Whole Genome Sequencing and Rapid Testing Methods [39] Genotyping of Mycobacterium tuberculosis spreading in Hanoi, Vietnam using conventional and whole genome sequencing methods. [40] Whole genome sequencing, analyses of drug resistance-conferring mutations, and correlation with transmission of Mycobacterium tuberculosis carrying katG-S315T in Hanoi, Vietnam. [41] Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues. [42] Molecular epidemiology and whole genome sequencing analysis of clinical Mycobacterium bovis from Ghana. [43] Whole genome sequencing in drug susceptibility testing of Mycobacterium tuberculosis in routine practice in Lyon, France. [44] Epidemiological cut-offs for Sensititre susceptibility testing of Mycobacterium tuberculosis: interpretive criteria cross validated with whole genome sequencing. [45] [Chromosomal abnormalities in spontaneous miscarriage specimens detected by combinatorial probe anchor synthesis-based high-throughput low coverage whole genome sequencing]. [46] COVID-19 re-infection by a phylogenetically distinct SARS-coronavirus-2 strain confirmed by whole genome sequencing [47] COVID-19 re-infection by a phylogenetically distinct SARS-coronavirus-2 strain confirmed by whole genome sequencing [48] whole genome sequencing and a new bioinformatics platform allow for rapid gene identification in d. melanogaster ems screens [49] Whole genome sequencing analysis of avian pathogenic Escherichia coli from China [50] High diversity of clinical Mycobacterium intracellulare in China revealed by whole genome sequencing