Journament

Keyword Connections - next-generation sequencing Keywords

Connection Type	Connection
Journals	Nature communications International journal of biological macromolecules ACS chemical biology Proceedings of the National Academy of Sciences of the United States of America advanced materials (deerfield beach, fla) Water research Journal of visualized experiments : JoVE Studies in health technology and informatics BMC research notes Applied and environmental microbiology journal of assisted reproduction and genetics Nature Medicine Journal of plant physiology biotechnology for biofuels orphanet journal of rare diseases human mutation acta medica academica Planta Journal of clinical immunology forensic science international genetics fetal diagnosis and therapy Digestive diseases and sciences the journal of general physiology cancer gene therapy
Research Groups	No Research Group Connected
Bibliographies	[1] Integrating host response and unbiased microbe detection for lower respiratory tract infection diagnosis in critically ill adults. [2] Quantitative metaproteomics of medieval dental calculus reveals individual oral health status. [3] Quasi-metagenomic Analysis of Salmonella from Food and Environmental Samples. [4] When next-generation sequencing-based preimplantation genetic testing for aneuploidy (PGT-A) yields an inconclusive report: diagnostic results and clinical outcomes after re biopsy. [5] SGPL1 mutation: one main trigger for invasiveness of pediatric alveolar rhabdomyosarcoma. [6] The contrasting microRNA content of a drought tolerant and a drought susceptible wheat cultivar. [7] Mitochondrial genomes of four satyrine butterflies and phylogenetic relationships of the family Nymphalidae (Lepidoptera: Papilionoidea). [8] Human Inborn Errors of Immunity: 2019 Update on the Classification from the International Union of Immunological Societies Expert Committee. [9] Mutational Mosaics of Cell-Free DNA from Pancreatic Cyst Fluids. [10] Bacterial community dynamics and disinfection impact in cooling water systems. [11] The Latin American experience with a next generation sequencing genetic panel for recessive limb-girdle muscular weakness and Pompe disease. [12] Phytoplankton growth characterization in short term MPN culture assays using 18S metabarcoding and qRT-PCR. [13] Microbial community dynamics in mesophilic and thermophilic batch reactors under methanogenic, phenyl acid-forming conditions. [14] Next-generation transcriptome assembly [15] Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks [16] characterization, development and multiplexing of microsatellite markers in three commercially exploited reef fish and their application for stock identification [17] paivs: prediction of avian influenza virus subtype [18] pair-barcode high-throughput sequencing for large-scale multiplexed sample analysis [19] diversity of cervical microbiota in asymptomatic chlamydia trachomatis genital infection: a pilot study [20] next generation sequencing: advances in characterizing the methylome [21] evaluation of 16s rrna gene primer pairs for monitoring microbial community structures showed high reproducibility within and low comparability between datasets generated with multiple archaeal and bacterial primer pairs [22] trio clinical exome sequencing in a patient with multicentric carpotarsal osteolysis syndrome: first case report in the balkans [23] genome sequencing of ancient plant remains: findings, uses and potential applications for the study and improvement of modern crops [24] the para-suite: par-clip specific sequence read simulation and processing [25] machine-learned association of next-generation sequencing-derived variants in thermosensitive ion channels genes with human thermal pain sensitivity phenotypes [26] standardization of sequencing coverage depth in ngs: recommendation for detection of clonal and subclonal mutations in cancer diagnostics [27] identification and functional analysis of the first aquaporin from striped stem borer, chilo suppressalis [28] transcriptomic identification of drought-related genes and ssr markers in sudan grass based on rna-seq [29] ecological and evolutionary implications of genomic structural variations [30] targeted ngs for species level phylogenomics: “made to measure” or “one size fits all”? [31] sicle: a high-throughput tool for extracting evolutionary relationships from phylogenetic trees [32] similarity thresholds used in dna sequence assembly from short reads can reduce the comparability of population histories across species [33] whole genome sequencing and a new bioinformatics platform allow for rapid gene identification in d. melanogaster ems screens [34] the past, present and future of immune repertoire biology – the rise of next-generation repertoire analysis [35] next-generation sequencing (ngs) for assessment of microbial water quality: current progress, challenges, and future opportunities [36] hundreds of snps versus dozens of ssrs: which dataset better characterizes natural clonal lineages in a self-fertilizing fish? [37] a hypothesis on the biological origins and social evolution of music and dance [38] sequencing and de novo assembly of a dahlia hybrid cultivar transcriptome [39] characterization of intra-type variants of oncogenic human papillomaviruses by next-generation deep sequencing of the e6/e7 region [40] Genome Mining Discovery of Protegenins A-D, Bacterial Polyynes Involved in the Antioomycete and Biocontrol Activities of . [41] A Single Nucleotide Change in the DNA Polymerase III in Clostridium thermocellum Is Sufficient To Create a Hypermutator Phenotype. [42] Genomic predictors of response to PD-1 inhibition in children with germline DNA replication repair deficiency. [43] Diagnosing water treatment critical control points for cyanobacterial removal: Exploring benefits of combined microscopy, next-generation sequencing, and cell integrity methods. [44] Profiling of the Causative Bacteria in Infected Lymphocysts after Lymphadenectomy for Gynecologic Cancer by Pyrosequencing the 16S Ribosomal RNA Gene Using Next-Generation Sequencing Technology [45] Variant Call Format (VCF)-Diagnostic Annotation and Reporting Tool (VCF-DART) A Customizable Analysis Pipeline for Identification of Clinically Relevant Genetic Variants in Next-Generation Sequencing Data. [46] Mutation spectrum of six genes in Chinese phenylketonuria patients obtained through next-generation sequencing. [47] Divide and conquer: A perspective on biochips for single-cell and rare-molecule analysis by next-generation sequencing. [48] Systematic analysis of transcriptomic profiles of COPD airway epithelium using next-generation sequencing and bioinformatics [49] Exploring evolution and diversity of Chinese Dipterocarpaceae using next-generation sequencing. [50] Validation of Extensive Next-Generation Sequencing Method for Monogenic Disorder Analysis on Cell-Free Fetal DNA: Noninvasive Prenatal Diagnosis [51] The Role of Next-Generation Sequencing in the Diagnosis of Lysosomal Storage Disorders [52] Uses of Next-Generation Sequencing Technologies for the Diagnosis of Primary Immunodeficiencies [53] Targeted next-generation sequencing panels for monogenetic disorders in clinical diagnostics: The opportunities and challenges [54] PIK3CA mutation is a favorable prognostic factor in esophageal cancer: molecular profile by next-generation sequencing using surgically resected formalin-fixed, paraffin-embedded tissue [55] First Isolation and Rapid Identification of Newcastle Disease Virus from Aborted Fetus of Dromedary Camel Using Next-Generation Sequencing. [56] A Substantial Proportion of Apparently Heterozygous TP53 Pathogenic Variants Detected with a Next-Generation Sequencing Hereditary Pan-Cancer Panel Are Acquired Somatically. [57] A next-generation sequencing method for overcoming the multiple gene copy problem in polyploid phylogenetics, applied to Poa grasses. [58] When next-generation sequencing-based preimplantation genetic testing for aneuploidy (PGT-A) yields an inconclusive report: diagnostic results and clinical outcomes after re biopsy. [59] Next-Generation Sequencing in Clinical Microbiology: Are We There Yet? [60] Identification of a comprehensive spectrum of genetic factors for hereditary breast cancer in a Chinese population by next-generation sequencing. [61] Clinical utility of next-generation sequencing for inherited bone marrow failure syndromes [62] Bacteriological analysis of saliva from partially or fully engorged female adult Rhipicephalus microplus by next-generation sequencing [63] characterization of black patina from the tiber river embankments using next-generation sequencing. [64] next-generation sequencing: advances and applications in cancer diagnosis [65] quality control of next-generation sequencing data without a reference [66] evaluation and comparison of two commercially available targeted next-generation sequencing platforms to assist oncology decision making [67] using next-generation sequencing for dna barcoding: capturing allelic variation in its2 [68] machine-learned association of next-generation sequencing-derived variants in thermosensitive ion channels genes with human thermal pain sensitivity phenotypes [69] next-generation sequencing of the complete mitochondrial genome of the endangered species black lion tamarin leontopithecus chrysopygus (primates) and mitogenomic phylogeny focusing on the callitrichidae family [70] measuring kras mutations in circulating tumor dna by droplet digital pcr and next-generation sequencing [71] next-generation sequencing (ngs) for assessment of microbial water quality: current progress, challenges, and future opportunities [72] unravelling the complexity of inherited retinal dystrophies molecular testing: added value of targeted next-generation sequencing [73] constructing a genome-wide ld map of wild a. gambiae using next-generation sequencing [74] two-phase and family-based designs for next-generation sequencing studies [75] next-generation sequencing in order to better characterize a brca variant of uncertain significance [76] Personalized Copy-Number and Segmental Duplication Maps using Next-Generation Sequencing [77] Novel next-generation sequencing-based methodologies to characterize the mutational consequences of (prenatal) chemotherapy exposure in noncancerous tissue [78] Personalized copy number and segmental duplication maps using next-generation sequencing [79] Amplicon-based next-generation sequencing reveals the co-existence of multiple Leishmania species in patients with visceral leishmaniasis.